Infectious diseases — USMLE Step 2 CK Notes
Free, high-yield revision notes for USMLE Step 2 CK. Read here, or drill the same material as questions and flashcards in the app.
Respiratory
Pneumonia: Shunting; C02 low d/t hyperventilation
Community acquired pneumonia: Tx: Azithromycin/doxycycline
Typicals: S Pneu most common
H Influenza (most common in old smokers with COPD)
Atypicals: Resistant to beta lactams, hard to culture, can’t gram stain
-> subacute, dry cough and watery sputum
Mycoplasma: maculopapular rash, mild tranaminitis, Mild Anaemia d/t cold agglutinins
Legionella: GI Sx, mild tranaminitis, pulse-temp dissociation (relative bradycardia), hyponatremia
Legionnaires disease: Pulm + CNS Sx eg confusion; encephalitis
Chlamydia Psittaci: severe headache
Coxiella Burnetti: Q Fever (exposure to livestock), Flu like Sx and severe headache
Viruses: Influenza A and B (most clinically significant)
Fungal: Can all present chronically and mimic TB (constitutionalists Sx and cavitary lesions)
Histoplasma:
Soil contaminated by bat and bird droppings: Caves, chicken coops, Ohio/Mississippi River Valleys
Mild/asymp: Erythema nodosum or multiforme, arthralgias
Blastomyces:
Inhalation of mould spores in disturbed soil (outdoor occupations), Ohio/Mississippi River Valleys and Great Lakes; Skin Lesions, osteomyelitis (well circumscribed, lytic lesions)
Coccidiodes:
Soil, SW US and N Mexico (Valley Fever), Erythema nodusum or multiforme, arthralgias, subacute
Tx: Pulm blasto: Itraconazole (histo/coccoi don’t norm need tx); Severe fungal: Amphotericin B
Silver stain for PCP
Urinary Ag for Legionella (v sensitive), persists even after tx commences
Dx: CXR False neg CXR in neutropenia, dehydration, PCP infection and disease <24 hrs
Do CT if negative CXR but high suspicion in any case
Fremitus: Sounds norm only heard in large airways transmitted to periphery in Pneu, same principle for consolidation
Hemoptysis: MRSA associated necrotising pneumonia: preferentially attacks young pts with influenza
Cavitation lesions: Klebsiella, TB
Nosocomial Pneumonia
Hospital acquired (HAP) and Ventilation associated (VAP):
VENTILATED PTS CANNOT COUGH: mucociliary clearance impaired
Positive P impairs ability to clear colonisation
Pseudomonas (most common), Klebsiella etc
General Pneu SX: Pleuritic chest pain and cough (productive purulent sputum)
Repositioning of patient can increase V/Q mismatch (gravity), increased intrapulmonary shunt and
worsening hypoxaemia.
Aspiration Pneumonia
Anaerobic bacteria from upper airways: Peptostreptococcus, Fusobac, Prevotella, Bacteroides
Foul smelling sputum characteristic of anaerobes
CAP pathogens from oropharynx: S Aureus, S Pneu
Chemical pneumonitis d/t stomach acid can set patient up for bacterial superinfection
Tx: Ampicillin-sulfactam or Metronidazole + amoxicillin/Pen G
CF: Under 20 yrs: S aureus
Over 20 yrs: Pseudomonas
Repeated pneumonia in same area: check for malignancy
Parapneumonic Effusion: bacteria invade pleural space
Pleural fluid pH <7.2, glucose <2.2 mmol/l, LDH >1000
Can progress to Empyema: Frank pus aspirated/positive pleural fluid culture, large persistent, air-fluid layer ——>>>>>>>> Needs chest tube drainage
Management: CAP
CURBS 65:
Confusion, Uremia (BUN>20), RR (>29), BP (BP S<90 OR D<61), 65 (AGE >64) ## SCORE OF 3 OR MORE ADMIT
1-2 consider outpatient with close observation
EMPIRICAL CAP Tx: Cover common typicals and atypicals
Outpatients: PO Macrolide Or Doxycycline
If there are Risk Factors for MDR S Pneu in CAP:
ADD Antipneumococcal beta lactam: Amoxacillin (+/- clavulanic)/ ceftriaxone Or mono therapy: Resp fluoroquinolone (moxifloxacin or levofloxacin)
Inpatient CAP: IV Macrolide/Doxy + IV antipneumococcal beta lactam:
Or mono tx: Resp fluoroquinolone (IV)
High risk for Pseudomonas: Double Coverage: Mona’s Seafood Sketch
IV antipseudomonal beta lactam: Pip-tazo/ ceftazadine (3rd)/ cefepime, meropenem, imipenem
PLUS
IV antipseudomonal fluoroquinolone (covers atypicals too): Levo or Cipro
MRSA: Risk if recent Ab use —> Add Vancomycin or Linezolid
HAP/VAP: IV Pip-tazo/ cefepime/ levofloxacin.
—> Piperacillin has enhanced gram neg + anti pseudomonas
VAP: Occurs >48 hrs after intubation
Mostly d/t aspiration of oropharyngeal/gastric secretions
New pulm infiltrates; increased resp secretions; systemic sx + Worsened resp status and oxygenation
Dx: Sampling of LRT -> BAL
Prevention of VAP:
Head of bed elevation at 30-45 degrees to reduce retrograde movement of gastric secretions
Suction of subglottic secretions
Minimisation of pt transport to prevent movement of endotracheal tube
Limit use of gastric acid inhibition to reduce burden of microorganisms in gastric secretions
——-> PPIs a Risk factor
Influenza Pneu:
Complication of Influenza in high risk individuals
Acute worsening of sx, leukocytosis, bilateral diffuse interstitial infiltrates
Neuraminadase I (Oseltamivir and Zanamivir)
Other complications of influenza: Myositis, myocarditis, encephalitis and Transverse myelitis
Tx CAP for 5 days (only stopped if afebrile for 48HRS)
HAP/VAP for 7 days
Procalcitonin can monitor treatment (bacterial marker)
Buzzwords:
Just had Influenza: MRSA
Q Fever (Coxiella burnertti): Doxycycline
Tularaemia: Gentamycin
Lung Abscess:
Aspiration: Posterior segments of upper lobes and superior segments of lower lobes
Others: S Aureus, S Pneu, aerobic gram neg bacilli
Sputum sometimes blood tinged; Constitutional sx, cough etc
Dx: CXR: Thick walled cavitation with air-fluid levels
Tx: Clindamycin; AMP/AMOXICILLIN SUL/CLAV etc. —->>> VANC for S Aureus
Lemierre Syndrome: septic thrombophlebitis of int jugular vein
Usually d/t tonsillitis (also complication of dental work or mastoiditis)
Pt looks TOXIC w unilateral neck swelling/pain
Often d/t fusibacterium necrophorum:
——>> septic emboli to lungs —-> multiple periph lung nodules (some w cavitation)
Dx: US neck
Tx: IV ampicillin-sulbactam/ Clindamycin
Infectious Mononucleosis
25% false negative Monospot Test in first wk of illness
Transient hepatitis w LAD
Complications:
Acute airway obstruction
Autoimmune hemolytic anemia and thrombocytopoenia —> IgM cold Agglutinin 2-3 wks after onset
Tuberculosis
Aerobes
Primary TB usually asymptomatic; Pulmonary and constitutional sx
Pleural effusion poss, lower lobe, mediastinal LN involvement
Ghon and Ranke complexes are evidence of healed primary TB
Secondary TB: immunocompromised
Cough progresses from dry to purulent. Hemoptysis if advanced
Constitutional sx w Apical rales
Extrapulmonary TB
Any organ: LNs, pleura, Genitourinary tract, spine, intestine and meninges common
Miliary TB is hematogenous dissemination -> Common in HIV
Organomegaly, reticulonodular infiltrates on CXR, choroidal tubercles in eye
Obtain 3 morning sputum samples, takes 4-8 wks to culture
Granuloma (caseating) may not be present in later stages
Reactivation TB: lung apices/posterior (most oxygenated)
Diffuse reticulonodular pattern (millet seed): progressive primary TB or reactivation
Mediastinal or hilar opacities (also seen in histo or cocciodes)
Positive PPD if BCG vaccine, still treat with 9 months isoniazid
Organ transplant recipients, steroid users and HIV PPD <5
CXR to rule out active infection
With 3 negative sputum cultures ==> cannot rule out if negative (needs high burden of org)
NAAT higher sensitivity cf AFB stain but takes 24-48hrs
Initiate empiric tx if high suspicion: RIPE (2 mo) then 4 months of isoniazid w rifampin
The only ppl you give prophylaxis to if in contact with TB are kids <4 (INH for 9 months)
TB Meningitis ——> basilar Meningeal enhancement
—> presents over wks
Dx: NAAT or AFB CSF Smear
Rifampin: body fluids turn orange/red; induces CYP450
INH: Peripheral neuropathy and sideroblastic anemia (give B6); Hepatitis with mild bump in LFTs
Pyrazinamide: Benign hyperuricaemia
Ethambutol: Optic Neuritis and other colour vision abnormalities
Discontinue RIPE if LFTs rise above 3-5 times upper limit only as all hepatotoxic
Vit B6 deficiency: Stomatitis, glossitis, cheilosis, periph neuropathy, sideroblastic anemia
Negative tuberculin test in immunocompromised eg CKD and HIV
Invasive aspergillosis; neutropenia patient
Dx by biopsy and culture of lung mass
Eosinophilia
CXR shows nodular density (upper lobe) with surrounding ground glass opacity (Halo sign)
Shotty (pellet like) Cervical adenopathy
Triad: Pleuritic chest pain, fever and Hemoptysis (Bronchiecstasis) (Thick brown sputum)
Tx: Voriconazole +/- capsofungin
Allergic bronchopulmonary -> ABPA
RF: Poorly controlled asthma and CF
Hypersensitivity and impaired clearance
Bronchiecstasis with thick brown sputum
Pleuritic chest pain; Recurrent fleeting infiltrates
Dx: Positive skin test for Aspergillus; Eosinophilia; Aspergillus IgG; elevated Aspergillus and total IgE
Tx: Steroids; Itraconazole
Chronic Pulm Aspergillosis
Lung disease/damage (cavitary TB)
3 MONTHS; weight loss, cough, , fatigue
Cavitary lesion +/- mobile (positioning pt) fungal ball (aspergilloma-> Hemoptysis
Tx: resect aspergilloma if poss; voriconazole; embolisation if severe Hemoptysis
Acute Bronchitis
Usually has preceding viral illness
Small amounts of blood in sputum can occur
Cough >5 days to 3 wks with absent systemic findings
Symptomatic tx
Pertussis Postexposure Prophylaxis
Antibiotics in ALL regardless of immunisation: Macrolide
Fungi
Histoplasmosis
Most common endemic my obsession in US TB mimicking Disease
Pulmonary sx with mediastinal or hilar LNs/masses, arthralgias and erythema Nodosum
Hilar/Mediastinal LAD
Diffuse reticulonodular miliary/focal infiltrates
Caseating (most common) or non caseating granulomas
Disseminated disease:
Febrile, wasting disorder w SOB, Cough; mucocutaneous (papules/nodules) involvement
RES manifestations: LAD, Hepatomegaly
BM infiltration causes pancytopenia
Dx: Culture takes wks; Histo Ag in blood/urine confirms dx rapidly
Tx: Itraconaziole for mild/mod; IV liposomal AmpB for severe
Blastomycosis
Long incubation : 3-6 wks
Disseminated disease may occur in immunosuppressed
TB/Histo mimicking Disease
Lung: Acute and chronic pneumonia (usually mild to moderate)
Skin: Wartlike lesions, painless well circumscribed violaceous nodule/heaped up verrucous lesions,
skin ulcers —->> May evolve into microabscesses
Bone: Osteomyelitis and lytic bone lesions
CNS: Meningitis, epidural or brain abscesses
Tx: Depends on severity
Supportive/Oral Itraconazole/IV AmpB
Coccidiomycosis (Valley Fever)
Subclinical/ CAP; > 1 wk of resp sx
Arthralgias, erythema nodosum or erythema multiforme
Mild/moderate cases need no tx
Meningitis
Increased ICP: Increased opening pressure
Empiric tx: Vanc + Ceftriaxone + steroids if bacterial source suspected
Kernig sign: hip flexed to 90 degrees —> extending knee stretches meningeal lining of spinal cord
—> pain
Severe myalgias: Diffuse leg pain etc
Cold hands/feet Mottled skin/pallor
Bacterial:
High WBCs (>1000 PMNS), LOW GLUCOSE, HIGH PROTEIN
CSF cloudy
Aseptic: nonpyogenic
Lymphocytic pleocytosis is typical (<1000 WBCs)
GLUCOSE NORMAL, PROTEIN NORMAL/HIGH
CSF may be normal
Normal CSF: Lymphocytes and monocytes, NO PMNs, <5 WBCs
TB: Tx with RIPE + Steroids
LYME MEN: IV Ceftriaxone
Tx: ALL: Ceftriaxone and vancomycin (cephalosporin R pneumococci)
——->> Add ampicillin if over 50 or under 3 months to cover Listeria Cefotaxime + Amp only if meningitis suspected If neonate (cant have Ceftriaxone) ——> Trimethoprim-sul used as alternative
Ceftazadime if impaired cellular immunity (P aeruginosa)
===>>> immunosuppressed get cefepime/ceftazadime + vancomycin + ampicillin
Cefepime 4th gen and covers Step; Neis; Haem + Pseudomonas Penetrating skull injury: Vanc + cefepime
Prophylactic IM Ceftriaxone or rifampin for contacts
Encephalitis
Usually viral: HSV1, Arbovirus, Enterovirus (eg Polio)
Toxoplasmosis, cerebral aspergillosis
Non infectious: Metabolic encephalopathy, T Cell lymphoma
Prodrome of headache malaise and myalgia
Poss focal neurological findings and seizures
Dx: CSF PCR, MRI
HSV Encephalitis:
Altered mental state; personality changes; fever; headache; nausea
+/- Focal neuro findings: hemiparesis, CN Palsies, ataxia
CSF: RBCs, HSV DNA on PCR
Temporal lobe hemorrhage/oedema on MRI
—> Increased areas of T2 signal in frontotemporal localisation consistent with HSV1
EEG would show temporal lobe discharges
Tx: IV Acyclovir
Infections post transplantation:
<1 month likely bacterial
1-6 months opportunistic: CMV, Aspergillus, TB ——> in setting of high dose immunosuppressives
——>> Tissue Invasive CMV Disease: Pneumonitis, gastroenteritis and hepatitis
Zoonotes and Others
Cat Bites: Pasteurella Multocida —-> cellulitis; Anaerobic bacteria
Management
Copious irrrigation and cleaning
Prophylactic/Tx amoxicillin/clavulanate
Tetanus booster if indicated
Avoid closure
Suppurative Parotitis
Retrograde seeding of bacteria from oral cavity: Staph Aureus, oral flora
Firm, erythematous pre/post auricular swelling
Exquisite tenderness exacerbated by chewing and palpation
——> Often purulent fluid can be expressed
Trismus, systemic findings (fever, chills)
Elevated serum amylase w/o pancreatitis
Management: US/CT to assess obstruction/abscess
Hydration, oral hygiene (increase saliva)
Abs; Sialagogues (increase saliva flow)
Ludwig Angina
Rapidly progressive cellulitis of submandibular space
Often d/t dental infections in mandibular molars
Polymicrobial: oral aerobes (S. Viridans) and anaerobes —>> crepitus
Systemic sx and local compressive (oedema) manifestations:
Mouth pain, drooling, dysphagia, muffled voice, airway compromise
Submandibular area often tender and induration
Floor of mouth elevated d/t swelling, displacing tongue
Dx: CT (also to rule out abscess)
Tx: IV Abs and removal of offending tooth; Mechanical airway
Ramsay hunt Syndrome (herpes zoster oticus)
Ear pain
Facial weakness (palsy) —> reactivation in geniculate ganglion
Vesicular rash in ext auditory canal
Tx: Corticosteroids and antivirals
Herpes zoster pain
Acute: <30 days from rash onset: NSAIDs +analgesics
Subacute: less recent onset; Resolves within 4 months: NSAIDs +analgesics
Postherpetic neuralgia (PHN): pain > 3 months after rash healed
Tx: TCA, Gabapentin/Pregabalin
Anti viral tx (valcyclovir) can shorten course of acute shingles and reduce risk of PHN
——>>> PHN not associated with ongoing rep so antivirals useless
Chikungunya Fever
Aedes mosquito
Severe polyarthralgias
Headache, myalgias, conjunctions, maculopapular rash
Lymphopoenia, thrombocytopenia, transaminitis
Tx: Supportive
Chronic arthralgias/arthritis in >50% —->>> may need methotrexate
Leprosy
Well demarcated lesion, anesthetic, often hypo pigmentation or erythematous
Grows in cool ares eg skin and periph nerves —> neuropathy
Nearby nerves often become hairless, nodular and tender —–>> Loss in sensory and motor function
Lepromatous form: Thickened forehead etc (leonine facies) -> d/t no Th1 response
Paucibacillary (minimal lesions/tuberculoid) tx with Dapsone and Rifampin
Multibacillary (lepromatous) use Clofazimine —> Th2 response (humoral)
False positive on VLDR possible
Enterobius vermicularis (pinworm)
Tx: Pyrantel Pamoate/ Albendazole
Schistosomiasis
Tx: Praziquantel
Tick-borne paralysis
D/t Neurotoxin release
Progressive ascending paralysis over hours to days
May be localised or more pronounced in 1 leg or arm
Sensation normal; no AN Dysfunction (cf GBS)
CSF normal
Management: Meticulous search for ticks
Babesiosis (tick born Protozoa)
Ixodes Tic (NE USA)
RF for severe illness: Splenectomy
Flu like sx and leukocytosis
Severe: ARDS, CHF, DIC splenic rupture
Anaemia, thrombocytopenia, increased bilirubin/LDH/LFTs; mild hepatosplenomegaly
===> intravascular hemolytic anemia —> jaundice, dark urine etc
Dx: Thin blood smear (intraerythrocytic rings: Maltese Cross)
Tx: Atovaquone + azithromycin
Quinine + Clindamycin (if severe)
Ehrlichiosis (monocytes) / Anaplasmosis (granulocytes)
Lone star tic (ixodes spp)
Leukopenia/thrombocytopoenia
Nonspecific flu like sx
Tx: Doxycycline; Chloramphenicol (side effects inc blood dyscrasias)
Bartonella Henselae
Regional TENDER, erythematous LAD: epitrochlear, supraclavicular and cervical chains
Lyme Disease:
Early localised (days to 1 month): Erythema Migrans, fatigue, headache, myalgias, arthralgias
Early disseminated (wks to months):
Heart block, meningitis, Facial N Palsy (often bilateral), Carditis (AV Block)
Multiple erythema migrans; Migratory Arthralgias Late (months to years): Arthritis, encephalitis, Periph neuropathy
Tick must be attached for 48-72 hrs to cause disease
—-> pathogen only migrates after this level of feeding
Tx: Mild/Skin disease —> Oral Abs —> Amoxicillin/ Doxy if >8 yrs
Neuro/cardiac disease —> IV Ceftriaxone. —> IV Ceftriaxone if Meningitis to penetrate CFS
Malaria
Non African countries: P Vivax —> dormant hepatic phase
Fever, chills, flu like
Tx: Chloroquine preferred in non resistant areas; artemisin based combo tx;
primaquine for dormant phase (w/o pts will relapse)
Africa: P falciparum
Fever, chills, flu like
More severe (altered mental state; multi organ failure)
Tx: Chloroquine preferred in non resistant areas; artemisin based combo tx
Neutropenia Fever
Medical Emergency
Absolute neutrophil count <500
Never give DRE as can induce bacteraemia
Most commonly d/t pseudomonas
Mucositis secondary to chemo causes bacteraemia (usually from gut)
Add Vanc if line infection suspected or if in septic shock
Add Amphotericin B if no improvement and no source found in 5 days
NB Neutropoenic pt may not mount a fever with sepsis d/t decreased inflamm cytokines
Rash on wrists and ankles (palms and soles), fever and headaches
Rickettsia: DOXYCYCLINE even if kid!
Tick bite, no rash, headache, fever, headache, low Plts and WBC, increased ALT
Ehrlichiosis: DOXYCYCLINE FOR ALL
Ricky Mountain Spotted Fever w/o rash
Dx: morulae intracell inclusion
Cavitary lung dz (purulent sputum)
Gram + aerobic branching partially acid fast: NOCARDIA
Trim-Sulfa
Neck/face infection w draining yellow material (sulfur granules)
Gram + anaerobic branching: ACTINOMYCES
High dose penicillin for 6-12 wks
Parvovirus B19
Transient red cell aplasia
Acute symmetric arthralgias/arthritis: Resembles RA
Constitutional sx: fatigue
Nonspecific rash more common in adults than slapped cheek
Hepatic Infections
Hepatitis: EBV, CMV and HSV can cause hepatitis in immunocompromised
Hydatiform Cyst: Echinococcus Granulosa (dogs)
Eggshell calcification on CT
Tx: Resection with albendazole cover
Risk of anaphylactic shock
Botulism
Symmetric DESCENDING flaccid paralysis Spores only dangerous to infants —> Soil spores (California; Pennsylvania; Utah); honey
Preformed toxin required to infect adult -> inactivated at temperatures of 100 degrees Celsius
Toxin inhibits Ach release (presynaptic) at NMJ
Can be mild and self limiting or fatal
4Ds: Dry mouth, diplopia and/or dysarthria, limb paralysis occurs later
DX: Toxin
Tx: equine Antitoxin (toxoid) immediately if suspected
Tx: human derived antitoxin in kids
Wound Botulism
Spores contaminate puncture wound eg IVDU
Fever and leukocytosis Within ~10 days (cf hours in food borne)
Sensory abnormalities and confusion rare
Ptosis; dilated sluggish to react pupils
—-> descending motor paralysis w progressive resp compromise
—-> inability to hold head up; CN Palsy and resp failure
Autonomic dysfunction: Ileus, orthostatic hypotension, urinary retention
Tx: equine botulinum antitoxin (dont delay for confirmation)
Intra abdominal abscess Causes: osteomyelitis of vertebral bodies (retroperitoneal extension)
Dx: CT or US
Tx: Drainage and broad spectrum antibiotics
Shigella: Outbreaks in daycare centres (paeds)
Can cause HUS
Causes seizure in kids
Tx: Abs only if severe
Salmonella
Typhoidal: Typhoid fever (GI Sx less so)
Bacteraemia; fever; abdo pain
Rose spots; HSM; intestinal perforation
Contaminated food/water
Tx: Abs (ceftriaxone); can be fatal
Non typhoidal: GI Sx
Vomiting and diarrhoea (May be non bloody)
Under cooked poultry/eggs
Selflimited; Abs not usually needed
E Coli most common cause of bloody diarrhoea in absence of fever
C perfrigens: Non bloody diarrhoea and abdo pain
Rotavirus: Fever, vomiting and profuse watery diarrhoea —>> dehydration
Seizures and encephalopathy
Entamoeba Histolytica
Hepatomegaly w high alk phos and LFTs
Colitis: Diarrhoea, bloody stool and abdo pain
Liver abscess: RUQ Pain, Fever -> Dx serology; US
R lobe cystic lesion d/t greater portal blood supply; raised ALP
Complications: Rupture to pleura/peritoneum
Dx: Stool ova and parasites; stool Ag testing (colitis)
Tx: Metronidazole and intralumnal Ab (eg paromomycin)
Giardiasis
Disruption of epithelial tight junctions in SI
Malabsorption and acute weight loss
Watery, foul smelling diarrhoea w steatorrhea 1-2 wks post exposure
Sx usually self resolve within a months
Dx: Stool Ag or nucleic acid amplification test
Tx: Tinidazole (recommended for pts at high risk of disseminated disease or symptomatic pts)
Untreated can lead to chronic carriage and malabsorption in some —-> Vit def etc
Infections of Genitourinary Tract
E Coli MCC of UTI
Risk Factors:
Use of diaphragms and spermicides alters vaginal colonisation
Condoms/diaphragms associated w increased friction ==> UTI
Pregnancy
Spinal cord injury, DM
Uncircumcised males
Structural/functional abnormal that impedes urine flow eg BPH, Caliculi etc
Anal sex, sex with partner colonised by pathogens
Suprapubic tenderness
In lower UTIs fever absent
Dx: Dipstick analysis
Positive urine leukocyte esterase (pyuria—> WBCs/pus)
Positive nitrite (Enterobacteriaceae), lacks sensitivity for other organisms
UTI in pregnancy: Preterm labour, low birth weight and others, esp in late pregnancy
BACTERIURIA without WBCs: contamination -> >10 WBCs/uL is abnormal
Complicated UTI
Any UTI that spread beyond bladder/associated factors that increase the risk of antibiotic resistance or treatment failure
Do urine culture prior to Tx
Acute, uncomplicated UTI
Oral TMP/SMX, Nitrofurantoin, Fosfomycin, Fluoroquinolones
Phenazopyridine is a urinary analgesic for dysuria
Pregnant: Ampicillin, amoxicillin or oral cephalosporins
Nitrofurantoin first line
More than 2 UTIs per year give prophylaxis TMP/SMX
Pyelonephritis
E Coli most common,
N/V and diarrhoea may be present
Signs: Fever with tachycardia
Abdo tenderness on examination
Dx: Pyuria, Bacteriuria and LEUKOCYTE CASTS
Renal Function normally preserved
Imaging studies if complicated or fails to respond to treatment
Tx: Uncomplicated: TMP/SMX or fluoroquinolone for 10-14 days (gram negatives)
Amoxicillin for Gram positive
Single dose of ceftriaxone/gentamicin usually given initially Pregnant/Elderly/very ill/Urosepsis: IV Ampicillin + gentamicin/ciprofloxacin
If vomiting cannot give oral!
Prostatitis: boggy, tender prostate
Acute bacterial less common than chronic and more serious
Younger men
Fever, chills, pts appear toxic
Irritating voiding Sx
Perineal pain, low back pain and urinary retention
Avoid prostatic massage/DRE as can cause bacteraemia
Tx: TMP/SMX or fluoroquinolone and Doxycycline
Chronic Prostatitis: many asymp
Men 40-70 years (Young and middle aged)
E Coli causes 75%
Fever uncommon
Pts frequently have sxs of recurrent UTIs that transiently improve with Abs
Dull, poorly localised pain in lower back, perineal, scrotal or suprapubic region
Hx of antibiotic tx —>> transient improvement
Prostate may not be tender but is enlarged
Pain with ejaculation
Tx: Fluoroquinolone (v difficult to eradicate) for 6wks
Non bacterial prostatitis has no bacteria but form of chronic prostatitis
Acute Epididymitis
Age <35 STI eg chlamydia
Age >35 d/t bladder outlet obstruction so Colifirm bacteria eg E. coli
Dysuria, frequency w Coliform infection —-> not common in <35 yr old
Unilateral, posterior testicular pain
Epididymis oedema
Pain improved w testicular elevation (Prehn sign)
Dx: NAAT for Gon and chlamydia; U/A w culture
Sexually Transmitted Diseases
Genital warts: HPV
Causes verrucas etc
Chylamydia
80% Reactive Arthritis cases (STI no longer present)
Many people are coinfected with gonorrhea
Purulent, dysuria, fever, scrotal pain and swelling, AUB
Dx: Culture, enzyme immunoassay, PCR (higher sensitivity), not serology!
Sexually active adolescents should be screened even if asymptomatic
Risk factor for cervical cancer (increases with number of infections)
Complications:
Epididymitis and Proctitis
PID, Salpingitis, turbo-ovarian abscess, ectopic pregnancy and Fitz-Hugh-Curtis syndrome
Leading cause of female infertility d/t tubal scarring
Tx: Azithromycin (oral single dose) or doxycycline for 7 days
Gonorrhea
Usually asymptomatic in F but symptomatic in MEN
Infection of pharynx, conjunctiva and rectum can occur
Purulent discharge, dysuria, erythema and edema of urethral meatus, increased frequency
AUB, dyspareunia, sx of cervicitis/urethritis
Pharyngitis: norm asymp; edema; nontender cervical LAD
Disseminated infection (more common in F)
Fever, arthlagias, tenosynovitis (hands and feet) and pustular lesions on hands
Migratory polyarthriris/septic arthritis, endocarditis, meningitis
Skin rash (usually on distal extremities)
Complications:
PID with poss infertility and chronic pelvic pain
Epididymitis, Proctitis -> Tenesmus, mucopurulent anal discharge; pruritus
Salpingitis, turbo-ovarian abscess, Fitz-Hugh-Curtis Syn (perihepatitis, Increased LFTs, RUQ pain) Dx: Gram stain
Tx: IM ceftriaxone (single dose, also effective against syphilis)
Also give azithromycin/doxycycline for chylamydia coverage
Disseminated: Ceftriaxone IM/IV for 7 days
Urethritis in Men
Neisseria; Chlamydia; Mcoplasma genitalium; Trichomonas (rare)
Dysuria, discharge, urgency, increased voiding, pyuria
Dx: UA; Gram stain & Culture; NAAT —->> ‘culture negative’ likely chlamydia ——>>> as not recoverable on conventional culture nor Gram stained (use NAAT)
HIV and AIDS
Most common virus is HIV1
4 phases of infection:
Primary infection
Mono like syndrome post exposure
LAD and truncal maculopapular rash; Diarrhoea
Asymptomatic infection (seropositive but no clinical evidence)
Normal CD4 counts (>500)
Longest phase (4-7 years, varies widely)
Symptomatic HIV infection (pre-AIDS)
Evidence of immune system dysfunction
Persistent LAD
Localised fungal infections (nails, toes, mouth)
Recalcitrant vaginal yeast and trichomonal infections in F
Oral hairy leukoplakia on tongue
Seborrheic dermatitis, psoriasis exacerbations, molluscum, warts
Constitutional sx
AIDS
CD4 count <200
Untreated HIV CD4 count drops by about 50 per year
Continue to treat even if viral load undetectable
Dx: PCR RNA viral load test; P24 Ag Assay (viral load)
Seroconversion occurs 3-7 wks post infection, confirms dx
Negative ELISA excludes HIV (screen)
If ELISA Positive confirm with Western Blot (specific)
Dx of AIDS: Indicator condition or HIV1 seropositive person with CD4 <200
Tx: Antiretrovirals
Symptomatic pts/asymp pts with CD4 <500
Triple drug regimen HAART targets HIV rep at 3 different points in rep process:
2 Nucleoside reverse transcriptase inhibitors (requires phosphorylation) and 1 of:
Nonnucleoside reverse transcriptase inhibitor
Protease inhibitor (-navir)
Continued in pregnancy: <1000 viral load no C Section needed
Travel a lot for work…….
Acute retro viral Syndrome (looks like MONO)
Fever, fatigue, LAD, headache, pharyngitis, n/v/d, +/- aseptic Meningitis
Generalised maculopapular rash: oval, pink/red lesions; painful oral ulcers
New/bilateral Bell’s Palsy
Unexplained thrombocytopenia and fatigue
Unexplained >10% weight loss
Thrush, Zoster or Karposi Sarcoma
Zidovudine (AZT): GI, Leukopoenia and macrocytic anemia
Didanosine: pancreatitis, peripheral neuropathy
Abacavir: Hypersensitivity: rash, fever, n/v, muscle aches, SOB in first 6wks
—->> discontinue and never use again!
Indinavir: Nephrolithiasis and hyperbilirubinaemia
Tenovir: renal issue
Efavirenz: Sleepy, confuse, psycho
Post exposure prophylaxis: AZT, Lamivudine and nelfinavir for 4wks (Triple Drug Therapy)
Pneumonia
PCP
CD4 <200
Elevated LDH
Bilateral diffuse symmetrical Infiltrates on CXR ——>> Bronchoscopy with BAL to visualise bug
Tx: Trim-sulfa first line
IF ALLERGIC TO SULFA: trim-dapsone or pentamidine
Add steroids if PaO2 below 70
Prophylaxis if CD4 <200 until CD4 above 200 for 6 months
Trim-Sulfa/ Dapsone/ Atovaquone/ Aerosolised pentamidine (causes pancreatitis)
Common precipitation of SIADH and HIV pts at increased risk
TB
Screen all newly dx HIV for latent TB
HIV pts can have false negative PPD d/t low CD4
==> Positive PPD: Isoniazid + pyridoxine for 9 months
Or rifampin for 4 months
Diarrhoea
CMV
CD4 <50
Bloody, can see on biopsy
Tx: ganciclovir (neutropenia) or foscarnet (renal toxic)
MAC
CD4 <50
Diarrhoea, wasting, fevers, night sweats
Prophylaxis NO LONGER GIVEN
Tx with clarithromycin and ethambutol +/- rifampin
Cryptosporidium
CD4 <50
Swimming pools, dog feces
Watery diarrhoea with mucous
Oocysts are acid acid fast
Neurological signs
CD4 <200 —->> HIV associated neuro cognitive disorder (HAND) Long standing HIV (even with adequate HAART): Age >50
Ranges from asymp neurocognitive impairment to HIV associated dementia
Progressive decline in multiple cognitive domains
—> memory, attention, calculation, executive function
BG and nigrostriatal involvement —>> movement issues occur early in disorder
Personality changes, mood and behaviour disturbances
MRI shows diffuse brain atrophy, ventricular enlargement and increased white matter intensity Dx Clinical w neuropsychological testing Memory Problems or gait disturbance: AIDS Dementia complex
Multiple ring enhancing lesions: Toxo —> preference for basal ganglia
Tx: pyramethamine and sulfadiazine (+ leucovorin) for 6 wks
Primary CNS Lymphoma : One ring enhancing lesion
Mass lesion Most common in frontal cortex w Mass Effect
EBV and B cells
Tx: HAART
Seizure with de ja vu aura and 500 RBCs in CSF: HSV encephalitis (acyclovir)
Meningoencehalitis: Crytococcus
India Ink Stain; Ag; Culture on Sabouraud agar
CD4 <100
Develops over 2 wks
ICP sx d/t Blockage of CSF absorption
Neck stiffness and photophobia typically not present
Tx with Amphoteric B IV + flucytosine for 2 wks then fluconazole maintenance
CSF: Lymphocytosis w decreased glucose and increased protein
CD<50 CMV Retinitis (painless cf HSV)
PML
Hemisensory Loss, visual impairment, Babinski:
JC virus demyelination at grey-white jxn (not periventricular)
Multiple non enhancing lesions that do not cause mass effect
Sx are subacute and manifests reflect focal cortical involvement:
Altered mental status common
—> motor deficits (focal arm/leg weakness or hemiparesis), ataxia and vision abnormalities
MRI shows well delineated, asym (not diffuse) white mater lesions
Brain biopsy gold standard
Increased incidence in poorly controlled HIV
Vaccines given: ADULTS with HIV
HAV if chronic liver disease; IVDU; homosexual man
HBV
HPV ages 11-26
Meningococcus (A,C,W,Y) ages 11-18; large groups living in close proximity; splenic/complement def
Booster every 5 years
Pneumococcus: PCV13 once then PPSV23 8 wks later, 5 years later and at age 65
Tdap once (repeat with each pregnancy if F); Td every 10 years
Zoster if born post 1979 and no evidence of immunity
If CD4 <200 use recombinant inactivated but immune response likely blunted
Live vaccines CI: VZV; MMR if CD4 <200 If CD4 > 200 then should receive these vaccines if unimmunised!
Do not instigate HAART in setting of acute infection —->> immune reconstitution syndrome Delay for several wks
Opportunistic prophylaxis
CD4 <200: PCP
LDL elevated, BAL most accurate test
Use TMP/SMX
TB (Screen all yearly with PPD test)
Isoniazid with pyridoxine if PPD positive
CD4 <100:
MAC: Clarithromycin or azithromycin
Toxoplasmosis: TMP/SMX
Pneumococcal polysaccharide vaccine every 5-6 years
Influenza (Not nasal as live!) every year
Herpes Simplex
HSV1 lesions of oropharynx: Most ppl acquire in childhood (80% have HSV1)
HSV2 lesions of genitalia
Both can cause either
Replicates in dermis and epidermis
Lesions on erythematous base
Travels via SENSORY nerves to DRG (latent)
Transmitted via contact with active ulcerations or shedding from mucous membranes
Contracting one form of herpes confers some degree of cross immunity
Recurrence: Stress, fevers, infection and sun exposure
Tend to be shorter and less frequent over time
HSV1: Usually asymptomatic
Systemic manifestations (malaise, Fever) and oral lesions if sx
Oral lesions: Groups of vesicles on patches of erythematous skin
Herpes labialise (cold sores) most common on lips, painful, heal in 2-6 wks
HSV2: both PAINFUL w constitutional
Constitutional sx —-> Flu like achy etc
Tender inguinal LAD and vaginal and/or urethral discharge
Most transmission d/t asym viral shedding so abstinence when no outbreak not effective
Disseminated HSV
Immunocompromised usually
Encephalitis, meningitis, keratitis, chorioretinitis, pneumonitis and esophagitis
In pregnant women (rare) can be fatal to mother and child
Neonatal HSV (vertical transmission at delivery)
Congenital malformations, intrauterine growth retardation (IUGR), chorioamnionitis and even death
Ocular disease: HSV1/2: Keratitis, blepharitis and keratoconjunctivitis
Herpetic Whitlow: Infection of finger, common in healthcare workers
Painful vesicular lesions erupt at finger tip
Dx: Tzanck smear quickest test, use Wright stain -> Multinucleated giant cells.
Culture is gold standard
Tx: No cure
Mucocutaneous disease: Oral and/or topical acyclovir 7-10 days
Valcyclovir and famciclovir have better bioavailability
Oral acyclovir prophylaxis for frequent recurrences
Foscarnet for resistant disease in immunocompromised
Syphilis —> everything painless: Systemic disease with 4 stages:
Primary stage:
Chancre: PAINLESS, hard, crater like (indurated) lesion with clean base
Highly infectious
Inguinal LAD: Painless
Cannot be cultured so start tx regardless: IM benzathine pen G
Secondary stage: Maculopapular rash most common —>> extends to palms and soles
Flu like,
Epitrochlear LAD
Condylomata Lata: Raised, gray/white lesions that develop on mucosal surfaces (mouth, perineum)
Contagious stage
Latent stage: ASYM
Presence of positive serologic test in absence of clinical signs/sx
1/3 develop tertiary syphilis
Tertiary syphilis: Spirochetes invaded CSF
Up to 40 yrs post primary infection
Cardiovascular syphilis, neurosyphilis, gummas (subcutaneous granulomas)
Neurosyphilis: Dementia, personality changes and tabes dorsalis (post column degeneration)
Argyl-Robertsonian Pupils —->> accommodate but do not react to light
Dx: Dark field microscopy (definitive): sample of chancre shows spirochetes
Serology: Nontreponemal tests: RPF (high FN), VDRL (most common). Both +ve in SLE
-> Ideal for screening as high sensitivity
Treponemal tests: FTA-ABS (confirm), MHA-TP
More specific, confirmatory
Tx: Benzathine penicillin (one IM) -> Oral doxycycline for 2 wks if penicillin allergy
Latent/tertiary: Penicillin/ Ceftriaxone IM in 3 doses once a wk
Chancroid: EVERYTHING PAINFUL!
H. Ducreyi (Gram negative rod)
Rare in US (more in developing world)
Rarely systemic findings
PAINFUL genital ulcers: deep with ragged borders and soft, friable purulent base + yellow/grey exudate Satellite lesions poss
Unilateral tender inguinal LAD (BUBOES) appear 1-2 wks after ulcer, may suppurate
Dx: Clinically
Tx: Azithromycin, ceftriaxone, erythromycin or ciprofloxacin
Lymphogranuloma Venereum: C trachomatis Pain and Painless
PAINLESS small, shallow ulcers at site of inoculation, may go unnoticed
Tender Inguinal LAD (fluctuated Adenitis buboes) a few wks later (usually unilateral)
Poss constitutional sx
If untreated proctocolitis may develop
Obstruction of lymphatics may lead to elephantiasis of genitals
Dx: Serology
Tx: Doxycycline
Pediculosis pubis (pubic lice or crabs) Phthirus pubis
Transmitted through sex, clothing or towels
Severe pruritus in genital region, other hairy areas may be involved
Dx via examination
Tx: permethrin 1% shampoo
Granuloma inguinale: Painless and no LAD Klebsiella granulomatis (Donovanosis) -> beefy red lesions
Nodules coalescing in PAINLESS granulomatous ulcers-> nodules burst creating fleshy oozing lesions
Base may have granulation like tissue
No LAD!
Biopsy contains Donovan bodies (bipolar staining with safety pin appearance)
Nodule may be mistaken for LN (Pseudobuboe)
Constitutional sx poss
Vaccines
Live attenuated CI in those on immunosuppressives like TNF Antagonists eg adalilmumab for IBD
—-> YF, VZV, Influenza, MMR
HPV
Condylomata accumulata: AnoGenital warts: HPV 6 & 11
Range from smooth, flattened papules to exophytic/cauliflower like (verrucous) growths
Typically asymp and nontender but pruritic, friable lesions may occur
D/t chronic infection with low risk HPV strains
Pts with chronic tobacco use or immunosuppression (HIV) have elevated risk
Dx is clinical
Tx: Topical agents that chemically injure lesion (trichloroacetic acid, podophyllin resin) or
Stimulate immune response (imiquimod)
Surgical excision for larger lesions
AnoGenital warts in children usually self resolving -> Query sexual abuse in ages >4 to adolescences
May worsen during pregnancy d/t physiologic immunosuppression
Toxins/Poisons
Cyanide toxicity
Nitroprusside use in HTN emergency -> Metabolised to nitric oxide and cyanide ions
Prolonged infusions or high doses increase risk as does renal insufficiency (CKD)
Skin: Flushing (cherry red); cyanosis later
CNS: Altered mental state, HA, seizures and coma; hyperreflexia Cardiac: arrhythmias
Resp: Tachypnea followed by resp depression; pulm oedema
GI: Abdo pain, N/V
Renal: Metabolic lactic acidosis; renal failure
Carbon Monoxide Poisoning
Pulse oximetry usually normal as oximetry does no ddx between oxyHb and carboxyHb
AG metabolic acidosis d/t lactic acidosis
Permanent hypoxic brain injury can occur
Hyperintensity of globus pallidus on MRI
Cerebral hypoxia sx: headache, dizziness, confusion, DROWSINESS, seizure and coma
Tx: 100% O2 high flow
Acquired methemoglobinemia: Oxidising agents
Topical/local anaesthetics eg benzocaine; Dapsone; Nitrites (in infants)
Pulse oximetry often 85% regards of true oxygen saturation
—-> supplemental O2 does not improve cyanosis
Blood gas frequently shows falsely elevated oxygen saturation
==> So large oxygen saturation gap (>5% diff bet O2 sat on pulse oximetry & ABG)
Dark chocolate-coloured blood
Normal PaO2 Tx: methylene blue; high dose ascorbic acid if methylene CI (eg G6PD)
Acute Carbon monoxide poisoning induced MI: 1/3 of CO pts
Sx of myocardial ischemia:
Elevated Troponin I; chest pain w ECG changes; arrhythmias; pulm oedema
NO EVIDENCE OF CORONARY OBSTRUCTION
Arsenic Poisoning
Contaminated well water; Pressure treated wood; Pesticides/insecticides
Acute: Garlic breath, vomitting, watery diarrhoea, QTc prolongation
Chronic: Hypo/hyperpigmentation, hyperkeratosis, stocking glove neuropathy
Mild transaminitis, pancytopenia
Dx: arsenic in urine
Tx: Dimercaprol, DMSA (succimer)
Organophosphate Poisoning
Pesticides and Nerve Agents
Muscarinic sx
Nicotinic sx: Muscle weakness, paralysis, fasciculations
Management: Remove pts clothes, irrigate skin
Atropine reverses muscarinic sx
Pralidoxime reverses nicotinic sx (administer after atropine as can transiently INHIBIT AchEI and worsen)
DMARDs (antirheumatic drugs) MOA and Side Effects
Methotrexate: Hepatotoxic; stomatitis; cytopoenias
Leflunomide: Pyrimidine syn I —> hepatotoxic and Cytopoenias
Hydroxychloroquine: TNF & IL1 suppressor; antimalarial —> retinopathy
Sulfasalazine: TNF & IL1 suppressor —-> hepatotoxic; stomatitis; hemolytic anemia
TNF I eg etanercept/infliximab: infection; demyelination, congestive HF; Malignancy
Synthetic cathinone intoxication (bath salts)
Amphetamine analogs: ingested/inhaled/injected
Severe agitation, combativeness, psychosis, delirium, myoclonus, seizures
Mimics PCP but negative drug test
HTN and tachy
Prolonged duration of effect: can last up to a wk
Lead Poisoning
Basophilic stippling on periph smear
Neurological deficits: periph neuropathy (foot/wrist drop; cognitive dysfunc)
GI Sx (abdo pain; constipation)
Musculoskeletal sx: Joint pains; muscle aches
Fatigue and exertional SOB d/t microcytic, hypochromic anemia
NB Basophilic stippling also seen in Thalassemia and alcohol abuse
Tx: if >45 -> Succimer; Dimercapril + EDTA
Fetal hydantoin syndrome
Nail and digit hypoplasia; dysmorphic facies
Intellectual disability + Growth deficiency
Prenatal Cocaine exposure
Jitteriness; excessive sucking; Hyperactive Moro reflex
Neonatal withdrawal: LT effects on behaviour; attention and intelligence poss
Neonatal Abstinence Syndrome
Opiate withdrawal -> First few days of life and can last 4 wks
High pitched cry; sleeping and feeding difficulties
Tremors, seizures and AN Dysfunction (sneezing, sweating)
Tachypnea; Vomiting and diarrhoea
Tx: Supportive (soothing; low stimulation environment)
Medication if refractory
Prenatal opiate use
IUGR; Sudden infant death
Salicylate Intoxication
Mixed AG Metabolic acidosis w resp alkalosis
Use Winters Formula (CO2 will be lower than expected)
Near norm pH
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